Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924670.1_cds_XP_016472986.1_65162
CDS Infomation

[gene=LOC107794935] [db_xref=GeneID:107794935] [protein=transcription factor GTE10-like isoform X5] [protein_id=XP_016472986.1] [location=join(22818..24077,24188..24236,24371..24511,25340..25413,25515..25578,25725..25799,25881..25996,26089..26155,26235..26365,26448..26744)] [gbkey=CDS]
Sequence

ATGATGGGGAAGTCACGCAACGTTTCAAGAGATTATCTGTCTGGGTTTGTGCCGGATTAT
CGTCATGCTGTTGGAACAATGGCAGAATCTGAGGGTTTTGGTAGCTCAGGCCGAGTTGAA
ACTGAAATGACAGCTTCAGATGATTCTTGTGCACCGAAGAAGAGATGCATTAATTTGAGT
GCTGATGATTACGATCAATTTGGTGTACCTACTCAAGTCTTGTCGTTGTCCAAGATGTCA
TGCTCCGATAGAAAAGATTTGAAAATAAGGTTGAGGAATGAACTTGAACATGTTAGAATA
CTGCAGAAGAAAATTGCTTCTTTTAGCTCAAATTTTGGGGTTCTTTCACCTGTTAGTGAT
ATACATAGTTGCAGTGATGGGCTGAGGAGGCCAGGGGCGGAGGTATCTCAGAGTTTTATG
AAAGAAGCAAAAGTACCTCGCGGAAAGAAAAAGACTGCTCAAGGAAGAAATGGACCTCGA
ACAAAAGGATTAGGGGCTCGGCGGCCTGAGCCAGTGAAACAGGCTGTCTCAAACACTAGC
ATAGTGATGTTTATGAAACAATGCGAGACACTGCTAAACCGGATGATGTCACACCAATAT
GGTTGGGTCTTCAATGCGCCAGTTGATGTGGTAAAACTAAAAATCCCAGACTATTTCACT
GTTATTAAGCATCCAATGGATTTGGGGACCGTAAAATCGAAGTTGATGTCAGGGGAATAT
TTAAGTCCTTTGGAATTTTCTGCAGATGTGAGGCTCACCTTTAAGAATGCGATGACATAC
AATCCACCAGGAAACGACGTTCATATTATGGCTCAAACACTTAGCAAATTTTTCGAGGTT
AGATGGAAACAGATAGAGAAGAATATTCCTGTAGCAGAAGAAGAACCTTTACCTTCAAAG
TCGAGTGTTATTTTAGAAACTGAAAGTGAAGCTCCTTTAGTAGTACCACCTTATAAGAAG
AAGAAAATTTCTCCATTTGAAAACAAGGGTAGATCAGAACCGGTAAAGCAAGTCATGAGC
GATTTTGAGAAGCATAAACTCAGTATGGAGCTGGAGGCATTGCTGGCTGAATTACCTGAA
AAGATAATTGATTTCCTAAAAGAGAGCAGCCTTCATGGAAGTCAAGTTAGTGAAGATGAG
ATCGAGATTGATATTGATGCTCTCACTAATGATACACTGTACAAGTTACGGCAGCTTTTG
GATGAGTATCTACTGGATAAACAGAAAAGTCAGGCAAAAGCTGAACCTTGTGAGATGGAG
CTTCAGAATGAGTCTGGTTTTAGCAATTCATCCATGCAGCTATGCAAAGATGAGGAAGTC
GATATTGGAGGAAATGATCCACCTGTCTCAAGTTTCACACCCATGGAGATTGAAAAGGAC
CTTGTTCGTAGAGACAATAAATGCAGCAGCTCAAGTAGTTCTAGAAGTGATTCAGGCTCT
TCATCTAGTGATACAGACTCCGGGAGCTCTTCTAGTGGTGAATCTGATGGTGCTAATGGT
TCAATTCCCTTAACCAACCCAAAGCAGGTGACAGTGAGTTCTGGGCTGAGCTTTGAACAG
AAAGAGCTCGATCAACGACAGTGTAGAGATTCCTTGGATGGCTTTACAGAGCGGAATTCA
CAACCAAAGTCTATTTTAGGTGAACCCAATGATCATCATGAGGGGGAGAGTGCTCCACCT
GAGAGGCAAGTCTCCCCTGAGAAACTTTACCGTGCAGCGTCGTTGAGGAGTTGTTTTGCA
GATACCATATTAAAAGCGCAAGAGAAAACCCTTGAGAAGGGTGAAGTGTGGGACCCTGAG
AAGCTGAAGCTTGAGAAAGAGGAGCTTGAAAGGCGAAAGCGAGAAGAGAAAGCCCGCTTA
CAAGCAGAAGCTAAGGCCGCAGGTGAGGCCCGAAGAAAAGCTGAAGCAGAAGCTGCTGCA
GAAGCCAAAAAGAAACGAGAACTTGAAAGAGAAGCTGCACGCCAGGCTCTGCTGAAGATG
GAAAAGACAGTTGAAATCAATGAGAACAGTCAGTTTATGGAAGATCTGGAATTGTTTAGA
GCTGCTCCAGATGAACAATTAGAGAGGTTCACTGAAGAGACAAGCCCTGATCACTCTCAA
AATGGTCTTGGTAGTTTCAAATTCAAGGCAAGTAGTAACCCATTGGAGCAACTTGGATTG
TATATGAAGGGAGATGATGAGGATGAAGAAGAAAATGAATCACATAGTATTCCAGATTTA
TCAAATTGTCCTGAGGACATATCAAAAGATCCGGAGAAAGGAGAGATTGATTGA

Peptide Sequence

PEP ID

XP_016472986.1
PEP Infomation

PREDICTED: transcription factor GTE10-like isoform X5 [Nicotiana tabacum]
Sequence

MMGKSRNVSRDYLSGFVPDYRHAVGTMAESEGFGSSGRVETEMTASDDSCAPKKRCINLS
ADDYDQFGVPTQVLSLSKMSCSDRKDLKIRLRNELEHVRILQKKIASFSSNFGVLSPVSD
IHSCSDGLRRPGAEVSQSFMKEAKVPRGKKKTAQGRNGPRTKGLGARRPEPVKQAVSNTS
IVMFMKQCETLLNRMMSHQYGWVFNAPVDVVKLKIPDYFTVIKHPMDLGTVKSKLMSGEY
LSPLEFSADVRLTFKNAMTYNPPGNDVHIMAQTLSKFFEVRWKQIEKNIPVAEEEPLPSK
SSVILETESEAPLVVPPYKKKKISPFENKGRSEPVKQVMSDFEKHKLSMELEALLAELPE
KIIDFLKESSLHGSQVSEDEIEIDIDALTNDTLYKLRQLLDEYLLDKQKSQAKAEPCEME
LQNESGFSNSSMQLCKDEEVDIGGNDPPVSSFTPMEIEKDLVRRDNKCSSSSSSRSDSGS
SSSDTDSGSSSSGESDGANGSIPLTNPKQVTVSSGLSFEQKELDQRQCRDSLDGFTERNS
QPKSILGEPNDHHEGESAPPERQVSPEKLYRAASLRSCFADTILKAQEKTLEKGEVWDPE
KLKLEKEELERRKREEKARLQAEAKAAGEARRKAEAEAAAEAKKKRELEREAARQALLKM
EKTVEINENSQFMEDLELFRAAPDEQLERFTEETSPDHSQNGLGSFKFKASSNPLEQLGL
YMKGDDEDEEENESHSIPDLSNCPEDISKDPEKGEID

Transcript Sequence

Gene sequence data has not been registered.